AT6012 Design Research: Technology Transformations | MArch Semester 1

Research Ontology & Knowledge Graph

A Unified Modular Framework for Distributed Epistemological Systems in Regenerative Urban Research

v3.1 | December 2025 | Living Knowledge Commons | Cytoscape.js Visualisation

Theoretical Foundations: Ontologies and Knowledge Graphs in Design Research

This section establishes the scholarly foundations for employing ontological frameworks and knowledge graphs within architectural design research. Rather than treating these as mere organisational tools, we position them as epistemological instruments that fundamentally shape how knowledge is produced, validated, and transmitted within the Living Knowledge Commons pedagogy.

Purpose of This Framework

This ontological structure serves the AT6012 module's commitment to temporal knowledge production, where each student cohort contributes to a cumulative research commons rather than producing isolated, archived submissions. The framework enables genuine knowledge accumulation across academic years by providing stable conceptual infrastructure that future cohorts can extend rather than reinvent.

1. Background: From Philosophy to Information Science

1.1 Philosophical Origins

The term 'ontology' derives from Greek ontos (being) and logos (study), originally denoting the philosophical investigation of existence itself. Aristotle's Metaphysics defined ontology as the study of "being qua being", examining attributes that belong to entities by virtue of their fundamental nature rather than contingent circumstances (Guarino et al., 2009). This philosophical tradition distinguished ontology from empirical sciences by focusing on the structure of reality independent of specific observations.

The transition from philosophical to computational ontology occurred through knowledge engineering research in artificial intelligence during the late 1980s and early 1990s. Researchers recognised that intelligent systems required explicit representations of domain knowledge to enable interoperability and knowledge sharing across applications (Neches et al., 1991).

1.2 Computational Ontology: The Gruber Definition

The foundational definition that established ontology as a technical term in computer science emerged from Thomas Gruber's work at Stanford University's Knowledge Systems Laboratory:

DEFINITION (Gruber, 1993): "An ontology is an explicit specification of a conceptualisation." Key Terms Unpacked: ├── EXPLICIT: Types of concepts and constraints on their use are formally defined ├── SPECIFICATION: Machine-readable formal description ├── CONCEPTUALISATION: Abstract model of objects, concepts, and relationships │ └── "The objects, concepts, and other entities that are assumed to exist │ in some area of interest and the relationships that hold among them" └── SHARED: Represents consensus knowledge accepted by a community

Studer et al. (1998) subsequently refined this definition: "An ontology is a formal, explicit specification of a shared conceptualisation", emphasising both machine-readability and community consensus. This definition remains the most widely cited in information science literature, with Gruber's 1993 paper recognised as the highest-cited article in the history of Knowledge Acquisition journal.

1.3 The Semantic Web Vision

Tim Berners-Lee's Semantic Web manifesto (Berners-Lee et al., 2001) articulated a vision for ontology-structured web content:

"I have a dream for the Web [in which computers] become capable of analyzing all the data on the Web—the content, links, and transactions between people and computers. A 'Semantic Web', which makes this possible, has yet to emerge, but when it does, the day-to-day mechanisms of trade, bureaucracy and our daily lives will be handled by machines talking to machines."

1.4 Knowledge Graphs: The Google Catalyst

Whilst semantic web research developed throughout the 2000s, the term "knowledge graph" gained widespread recognition when Google launched its Knowledge Graph in May 2012. Built upon Freebase and containing over 570 million entities with 18 billion cross-references, Google's implementation demonstrated the practical power of structured knowledge representation for information retrieval.

Contemporary knowledge graphs are characterised by three core components:

ComponentDefinitionExample
Entities (Nodes)Objects, concepts, events, or situations represented in the graphMarseille, Dereliction, Urban Political Ecology
Relationships (Edges)Semantic connections between entities defining their associationsCOLONISES, PRODUCES, TRANSFORMS
Attributes (Properties)Characteristics of entities or relationshipslocation, temporal_state, agency_type

2. Definitions: Core Terminology

2.1 Ontology Components

ONTOLOGY STRUCTURAL ELEMENTS: CLASSES (Types): ├── Definition: Categories of entities sharing common characteristics ├── Function: Organise domain concepts into taxonomic hierarchies └── Example: SPATIAL_CONDITION, ACTOR_NETWORK, MATERIAL_FLOW INDIVIDUALS (Instances): ├── Definition: Specific members of classes ├── Function: Represent concrete entities in the domain └── Example: Saint-Louis (instance of Neighbourhood class) PROPERTIES (Relations): ├── Object Properties: Link individuals to other individuals │ └── Example: COLONISES, PRODUCES, TRANSFORMS ├── Data Properties: Link individuals to data values │ └── Example: vacancy_duration, contamination_level └── Annotation Properties: Metadata about ontology elements AXIOMS (Rules): ├── Definition: Logical statements constraining valid interpretations ├── Function: Enable automated reasoning and consistency checking └── Example: "Dereliction enables alternative Actor_Networks to emerge"

2.2 Distinguishing Ontologies from Related Concepts

ConceptCharacteristicsRelationship to Ontology
TaxonomyHierarchical classification systemOntologies may contain taxonomies but add richer semantics
ThesaurusControlled vocabulary with synonyms/antonymsOntologies provide formal definitions beyond term relationships
Database SchemaData structure specificationOntologies operate at higher abstraction, enabling schema integration
Conceptual ModelAbstract representation of domainOntologies add formal logic enabling automated reasoning

3. Premise: Why Ontological Framing for Architectural Research?

3.1 The Knowledge Fragmentation Problem

Architectural design research confronts a fundamental challenge: knowledge generated through studio projects, technical dossiers, and field investigations typically exists as isolated artefacts. Traditional assessment models produce individual submissions that are graded, archived, and effectively lost to subsequent cohorts. This pattern contradicts the regenerative principles central to AT6012's pedagogical vision.

The Living Knowledge Commons approach requires infrastructure that enables:

  • Cumulative knowledge production across temporal boundaries
  • Explicit representation of conceptual relationships between projects
  • Traceable intellectual lineages from foundational texts to student applications
  • Machine-readable structures supporting future computational analysis

3.2 Assembly Theory Alignment

The ontological framework aligns with the module's integration of Assembly Theory (Walker & Cronin, 2024). Just as assembly theory quantifies complexity through construction histories, ontological structures make explicit the "assembly index" of knowledge:

Knowledge Assembly Analogy

Low-Assembly Knowledge: Isolated student submission → Limited selection inputs → Not designed for reuse → Information loss upon archiving

High-Assembly Knowledge: Ontologically-structured contribution → Multiple selection pressures (theoretical frameworks, peer review, cross-cohort building) → Designed for extension → Information preservation through explicit structure

4. Usefulness & Effectiveness

4.1 Applications in Built Environment Research

Application DomainFunctionEvidence
BIM IntegrationSemantic enrichment of building models enabling automated compliance checkingIFC ontology standards; BuildingSMART specifications
Design Knowledge CaptureFormalising tacit architectural knowledge for reuseActivity/Space ontology research (Maher et al., 1997)
Cross-Project LearningEnabling case-based reasoning across design precedentsArchitectural case library systems
Constructability IntegrationIncorporating construction knowledge into early design phasesOff-site construction feature ontologies

4.2 Specific Benefits for AT6012

Immediate Pedagogical Benefits

Conceptual Clarity: Explicit entity definitions reduce ambiguity in group discussions and cross-project comparisons

Research Scaffolding: Structured templates guide students through systematic domain analysis

Citation Networks: Relationship mapping reveals theoretical lineages and identifies gaps

5. Annotated Bibliography: Core Sources

5.1 Foundational Ontology Literature

Gruber, T. R. (1993). A translation approach to portable ontology specifications. Knowledge Acquisition, 5(2), 199–220.

The foundational paper establishing ontology as "explicit specification of a conceptualisation." Essential reading for understanding why formal knowledge representation matters.

Studer, R., Benjamins, V. R., & Fensel, D. (1998). Knowledge engineering: Principles and methods. Data & Knowledge Engineering, 25(1–2), 161–198.

Synthesises Gruber's and Borst's definitions into: "An ontology is a formal, explicit specification of a shared conceptualisation."

Guarino, N., Oberle, D., & Staab, S. (2009). What is an ontology? In S. Staab & R. Studer (Eds.), Handbook on ontologies (2nd ed., pp. 1–17). Springer.

Comprehensive clarification of ontology concepts, distinguishing philosophical and computational usages.

5.2 AT6012 Theoretical Frameworks

Alberti, M. (2016). Cities that think like planets: Complexity, resilience, and innovation in hybrid ecosystems. University of Washington Press. https://doi.org/10.2307/j.ctvct00hm

Foundational text for understanding cities as complex adaptive systems. Provides conceptual vocabulary for urban ecology ontologies.

Haraway, D. J. (2016). Staying with the trouble: Making kin in the Chthulucene. Duke University Press. https://doi.org/10.1215/9780822373780

Source of sympoiesis concept ("making-with") that informs the Living Knowledge Commons pedagogy.

Moe, K. (2021). Unless: The Seagram Building construction ecology. Actar Publishers.

Articulates non-isolated thermodynamics in architecture. Buildings as dissipative structures within larger energy flows.

Evolution from Traditional Module to Living Knowledge System

AT6012 has evolved from a traditional educational module into a complex knowledge ecosystem. This transformation represents a fundamental shift in how we conceptualise architectural education—moving from knowledge transmission to knowledge production, from individual assessment to collective intelligence, and from archived outputs to living repositories.

Pedagogical Model
Individual Learning → Assessment → Archive
Collective Intelligence → Knowledge Production → Living Repository
Assessment Focus
Measuring individual performance
Generating new knowledge through collaboration
Temporal Scope
Single cohort, annual reset
Cross-cohort inheritance patterns
Network Position
Isolated institutional module
Connected to New European Bauhaus and international networks

Core Principles of the Living Knowledge Commons

1. Knowledge as Commons

Following Elinor Ostrom's principles for managing common-pool resources, the AT6012 knowledge system treats intellectual outputs not as individual property but as shared infrastructure. Students contribute to and draw from a commons that transcends individual cohorts, creating inheritance patterns where each year's work enriches resources available to future students.

2. Temporal Knowledge Production

Each cohort builds on previous work, creating exponential rather than linear growth. The versioning system (visible in this document's evolution from v2.1 to v3.1) ensures that knowledge persists and improves through iterative refinement. This mirrors assembly theory's insight that complex structures emerge through cumulative construction histories.

3. Multi-Scalar Integration

The knowledge system operates across scales: from molecular (timber properties, material composition) to territorial (urban systems, climate networks). This scalar thinking reflects the module's theoretical foundations in systems ecology and thermodynamic urbanism (Moe, 2014, 2021).

4. Open Science Principles

All outputs are licensed under CC BY-SA 4.0, enabling reuse, adaptation, and redistribution whilst requiring attribution and share-alike terms. This copyleft approach ensures knowledge remains accessible whilst acknowledging contributions.

Paradigm Shifts in Practice

Traditional ModelLiving Knowledge System
Not measuring learning but...Generating new knowledge
Not grading students but...Building archives for future cohorts
Not delivering content but...Investigating phenomena collectively
Not teaching skills but...Developing capabilities through practice
Not presenting information but...Connecting networks across institutions
Not visiting expert but...Collaborative researcher contributing to commons

System Health Indicators

The Living Knowledge Commons is monitored through key performance indicators that track both quantitative growth and qualitative development:

30%
Annual Repository Growth
Cross-Reference Connectivity
External Citation Impact
European Network Expansion
// Knowledge System Health Indicators { "repository_growth": "30% annually", "cross_references": "increasing_connectivity", "external_citations": "academic_impact", "industry_engagement": "practical_relevance", "student_innovations": "creative_emergence", "european_connections": "network_expansion", "sensor_data_streams": "real_time_integration", "git_commit_frequency": "collaboration_intensity" }

Unified Meta-Ontology: Living Knowledge Commons

This framework treats the 8 project groups not as isolated investigations but as instantiations of a common meta-schema. Following principles from assembly theory and complex adaptive systems thinking (Alberti, 2016), each group's ontology inherits from shared conceptual infrastructure whilst developing domain-specific extensions.

Foundational Axiom

"Urban form encodes power relations; spatial transformation is never neutral but always operates as an instrument of ecological, social, and political reconfiguration."

Knowledge Graph: Meta-Schema

Meta-Concepts
Dereliction/Decay
Temporal/Geological
Socio-Technical
Hydro/Surveillance

Emergent Thematic Clusters

ClusterMember GroupsShared Conceptual Domain
Dereliction/DecayG1, G2Urban political ecology, material transformation, spontaneous ecologies
Temporal/Geological ScalesG3Deep time, Anthropocene stratigraphy, technofossil formation
Socio-Technical SystemsG4, G5, G7AI collaboration, infrastructure critique, power geometries
Hydrology/SurveillanceG6, G8Water infrastructure, visibility regimes, territorial control

AT6012 Knowledge Graph Definition

# AT6012 Knowledge Graph Definition # Version: 3.1 | Academic Year: 2025-2026 Non_Isolated_Ecology: exemplified_by: - Timber_Material_Flows - Sensor_Networks - Knowledge_Commons connects: - Thermodynamics ↔ Material_Science - Local_Practice ↔ European_Standards - Past_Cohorts ↔ Future_Cohorts - Forest_Ecosystems ↔ Urban_Environments Assessment_as_Research: produces: - Digital_Repository: 50% - Technical_Dossier: 50% evaluates: - Collective_Capability # not individual performance - Knowledge_Generation # not knowledge reproduction - System_Innovation # not assignment completion Timber_Knowledge_Network: nodes: - Irish_Forestry - European_Expertise - NEB_Framework - Material_Science - Building_Performance guest_contributor: Andreja_Kutnar # InnoRenew CoE edges: - technology_transfer - policy_alignment - research_collaboration - material_flows Living_Repository: properties: temporal: continuous authorship: collective versioning: git media: [text, code, video, 3D, sensor_data] inheritance: from: previous_cohorts to: future_cohorts method: fork_and_extend Marseille_Connection: dates: October_2025 activities: - field_documentation - site_analysis - material_studies integration: repository_content

Cross-Thematic Connections

Shared ConceptGroups ConnectedRelationship Type
Urban Political EcologyG1, G2, G6, G7Theoretical framework
Non-Human AgencyG1, G2, G3Vegetation as actor, material persistence, ecological succession
Infrastructure CritiqueG5, G6, G7Infrastructure as power, resource extraction, systemic transformation
Temporal LayeringG3, G6Deep time, historical memory, stratigraphic reading
Design InterventionG4, G5AI collaboration, systemic change, speculative urbanism
Power & VisibilityG7, G8Foucauldian analysis, surveillance, control mechanisms

Primary Knowledge Nodes

The AT6012 knowledge system organises around four primary node types, each representing different modes of knowledge production and transmission within the Living Knowledge Commons.

Central Node
AT6012 Module

Living Knowledge Commons Temporal Accumulation Open Science

Attributes

Credits5 ECTS (part of 30-credit semester)
TypeResearch-Through-Making Laboratory
Assessment50% Group Digital Repository + 50% Technical Dossier
LicenceCC BY-SA 4.0

Relations

INTEGRATES_WITH: AT6011 Cultures & Context, AT6013 Design Research Studio PRODUCES: Living_Repository, Technical_Dossiers, Field_Documentation CONNECTS_TO: New_European_Bauhaus, International_Research_Networks INHERITS_FROM: Previous_Cohort_Work TRANSMITS_TO: Future_Cohorts
Exemplar System
Non-Isolated Ecology

Thermodynamics Material Flows Systems Thinking

Theoretical Foundation

Drawing on Kiel Moe's thermodynamic urbanism (Moe, 2014, 2021), this node represents the module's rejection of isolated systems thinking in favour of understanding buildings, cities, and knowledge systems as dissipative structures within larger energy and material flows.

Exemplified By

  • Timber material flows from forest to building to end-of-life
  • Sensor networks capturing real-time environmental data
  • Knowledge commons accumulating across cohort boundaries
  • European policy networks shaping local practice
CONNECTS: ├── Thermodynamics ↔ Material_Science ├── Local_Practice ↔ European_Standards ├── Past_Cohorts ↔ Future_Cohorts └── Forest_Ecosystems ↔ Urban_Environments
Network Node
Timber Knowledge Network

Material Ecology European Networks Policy Alignment

Network Components

NodeTypeConnection
Irish ForestryResource SystemMaterial supply, local practice
European ExpertiseKnowledge NetworkInnoRenew CoE, research collaboration
NEB FrameworkPolicy ContextNew European Bauhaus principles
Material ScienceResearch DomainWood properties, performance data
Building PerformanceApplication DomainStructural, thermal, acoustic
Guest Contributor

Professor Andreja Kutnar (InnoRenew CoE, University of Primorska) connects AT6012 to leading European timber research through the New European Bauhaus Academy network.

Process Node
Marseille Field Research

Mediterranean Context Field Documentation Cross-Context Analysis

Research Activities

  • Field documentation of urban conditions across 8 thematic lenses
  • Site analysis using multi-scalar frameworks (molecular → territorial)
  • Material studies connecting to thermodynamic approaches
  • Cross-context comparison with Cork and Dublin

Integration Method

Field research outputs feed directly into the Living Repository through structured documentation protocols. Each group's Marseille investigations become searchable, citeable contributions to the knowledge commons, available for future cohorts to build upon.

System Evolution Mechanisms

The ontology is designed to evolve through structured processes that enable both incremental refinement and transformative innovation. Following principles from adaptive management and complex systems theory, the framework includes explicit mechanisms for growth, revision, and extension.

Evolution Pathways

MechanismTriggerProcess
Student ContributionNew research findingsFork → Extend → Merge via technical dossier
Cross-Cohort InheritanceAnnual cycle completionArchive → Document → Transfer protocols
Guest Expert InputWorkshop/lecture seriesCapture → Integrate → Cross-reference
External CitationAcademic publicationVerify → Link → Attribute
Sensor IntegrationReal-time data streamsCapture → Process → Visualise → Archive

Group Output Structure

Groups: size: 3-4 students output: - repository_section: pages: 6-8 words: 2000-2500 media: mixed (text, images, diagrams, code, data) - technical_dossier: documentation: comprehensive reflection: 2000 words bibliography: 15+ sources (APA 7, verified DOIs) Sensor_Integration: types: - temperature - humidity - CO2 - timber_moisture - structural_movement data_flow: collection: real_time storage: cloud visualisation: dashboard integration: repository

Version Control & Attribution

The Living Knowledge Commons employs version control principles adapted from software development to track knowledge evolution:

Versioning Protocol
Major.Minor format (e.g., v3.1)

Major: Structural changes; Minor: Content additions

Attribution Method
Collective authorship with named contributors

Individual contributions tracked within collective framework

Inheritance Pattern
Fork → Extend → Merge

New cohorts build on previous work rather than starting fresh

Quality Assurance
Peer review + Expert validation

Multiple selection pressures ensure knowledge quality

Future Development Trajectories

The system is positioned to evolve along several trajectories:

  • Computational Enhancement: Integration with large language models for knowledge retrieval and synthesis
  • Sensor Network Expansion: Real-time environmental monitoring feeding into research ontology
  • Cross-Institutional Linking: Federation with partner institution knowledge systems
  • Policy Integration: Structured connection to New European Bauhaus frameworks
  • Public Engagement: Accessible interfaces for community stakeholders

Verified References (APA 7th Edition)

All citations have been verified against primary sources. DOIs are included only where confirmed authentic through publisher databases.

Core Theoretical Frameworks

Systems Thinking & Complexity

Alberti, M. (2016). Cities that think like planets: Complexity, resilience, and innovation in hybrid ecosystems. University of Washington Press. https://doi.org/10.2307/j.ctvct00hm

Capra, F., & Luisi, P. L. (2014). The systems view of life: A unifying vision. Cambridge University Press. https://doi.org/10.1017/CBO9780511895555

Walker, B., Holling, C. S., Carpenter, S. R., & Kinzig, A. (2004). Resilience, adaptability and transformability in social–ecological systems. Ecology and Society, 9(2), 5. https://doi.org/10.5751/ES-00650-090205

Meadows, D. H. (2008). Thinking in systems: A primer. Chelsea Green Publishing.

Urban Metabolism & Political Ecology

Baccini, P., & Brunner, P. H. (2012). Metabolism of the anthroposphere: Analysis, evaluation, design (2nd ed.). MIT Press. https://doi.org/10.7551/mitpress/9780262016659.001.0001

Regenerative Design

Cole, R. J. (2012). Transitioning from green to regenerative design. Building Research & Information, 40(1), 39–53. https://doi.org/10.1080/09613218.2011.610608

Reed, B. (2007). Shifting from 'sustainability' to regeneration. Building Research & Information, 35(6), 674–680. https://doi.org/10.1080/09613210701475753

Mang, P., & Reed, B. (2020). Regenerative development and design. In V. Loftness & D. Haase (Eds.), Sustainable built environments (pp. 115–141). Springer. https://doi.org/10.1007/978-1-0716-0684-1_303

Pawlyn, M., & Ichioka, S. (2022). Flourish: Design paradigms for our planetary emergency. RIBA Publishing. https://doi.org/10.4324/9781003205425

Thermodynamic Urbanism

Moe, K. (2014). Insulating modernism: Isolated and non-isolated thermodynamics in architecture. Birkhäuser.

Moe, K. (2021). Unless: The Seagram Building construction ecology. Actar Publishers.

Post-Human & More-Than-Human Thinking

Haraway, D. J. (2016). Staying with the trouble: Making kin in the Chthulucene. Duke University Press. https://doi.org/10.1215/9780822373780

Tsing, A. L. (2015). The mushroom at the end of the world: On the possibility of life in capitalist ruins. Princeton University Press.

Latour, B. (2005). Reassembling the social: An introduction to actor-network-theory. Oxford University Press.

Ontology & Knowledge Engineering

Gruber, T. R. (1993). A translation approach to portable ontology specifications. Knowledge Acquisition, 5(2), 199–220.

Studer, R., Benjamins, V. R., & Fensel, D. (1998). Knowledge engineering: Principles and methods. Data & Knowledge Engineering, 25(1–2), 161–198.

Guarino, N., Oberle, D., & Staab, S. (2009). What is an ontology? In S. Staab & R. Studer (Eds.), Handbook on ontologies (2nd ed., pp. 1–17). Springer.

Digital Technologies & BIM

Borrmann, A., König, M., Koch, C., & Beetz, J. (2018). Building information modeling: Technology foundations and industry practice. Springer. https://doi.org/10.1007/978-3-319-92862-3

Oxman, N. (2016). Age of entanglement. Journal of Design and Science. https://doi.org/10.21428/7e0583ad

Climate & Anthropocene

Steffen, W., Richardson, K., Rockström, J., Cornell, S. E., Fetzer, I., Bennett, E. M., Biggs, R., Carpenter, S. R., de Vries, W., de Wit, C. A., Folke, C., Gerten, D., Heinke, J., Mace, G. M., Persson, L. M., Ramanathan, V., Reyers, B., & Sörlin, S. (2015). Planetary boundaries: Guiding human development on a changing planet. Science, 347(6223), 1259855. https://doi.org/10.1126/science.1259855

Turpin, E. (Ed.). (2013). Architecture in the Anthropocene: Encounters among design, deep time, science and philosophy. Open Humanities Press. https://doi.org/10.3998/ohp.12527215.0001.001

Marseille Context

Firebrace, W. (2011). Marseille mix. AA Publications.

Rossi, A. (1982). The architecture of the city. MIT Press.

Design Philosophy & Methodology

Escobar, A. (2018). Designs for the pluriverse: Radical interdependence, autonomy, and the making of worlds. Duke University Press.

Sharpe, B. (2013). Three horizons: The patterning of hope. Triarchy Press.